A Linked Data Approach to Sharing Workflows and Workflow Results
نویسندگان
چکیده
A bioinformatics analysis pipeline is often highly elaborate, due to the inherent complexity of biological systems and the variety and size of laboratory publications would be highly beneficial to bioinformatics, for evaluating evidence and examining data across related experiments, while introducing the potential to find associated resources and integrate them as data and services. We present initial steps towards preserving bioinformatics design of a data analysis pipeline, and RDF to link the workflow, its component services, run-time provenance, and a personalized biological interpretation of the results. An example shows the reproduction of the unique graph of an analysis procedure, its results, provenance, and personal interpretation of a text mining experiment. It links data from Taverna, myExperiment.org, BioCatalogue.org, and ConceptWiki.org. The approach is relat unobtrusive to bioinformatics users.
منابع مشابه
A Clustering Approach to Scientific Workflow Scheduling on the Cloud with Deadline and Cost Constraints
One of the main features of High Throughput Computing systems is the availability of high power processing resources. Cloud Computing systems can offer these features through concepts like Pay-Per-Use and Quality of Service (QoS) over the Internet. Many applications in Cloud computing are represented by workflows. Quality of Service is one of the most important challenges in the context of sche...
متن کاملDynamic configuration and collaborative scheduling in supply chains based on scalable multi-agent architecture
Due to diversified and frequently changing demands from customers, technological advances and global competition, manufacturers rely on collaboration with their business partners to share costs, risks and expertise. How to take advantage of advancement of technologies to effectively support operations and create competitive advantage is critical for manufacturers to survive. To respond to these...
متن کاملTowards Open Publication of Reusable Scientific Workflows: Abstractions, Standards and Linked Data
In recent years, a variety of systems have been developed that export the workflows executed to analyze data and make them part of published articles. We argue that the workflows that are published with current approaches are dependent on the specific codes used for execution, the specific workflow system used, and the specific workflow catalogs where they are published. In this paper, we descr...
متن کاملAutomatic Workflow Generation and Modification by Enterprise Ontologies and Documents
This article presents a novel method and development paradigm that proposes a general template for an enterprise information structure and allows for the automatic generation and modification of enterprise workflows. This dynamically integrated workflow development approach utilises a conceptual ontology of domain processes and tasks, enterprise charts, and enterprise entities. It also suggests...
متن کاملAutomatic Workflow Generation and Modification by Enterprise Ontologies and Documents
This article presents a novel method and development paradigm that proposes a general template for an enterprise information structure and allows for the automatic generation and modification of enterprise workflows. This dynamically integrated workflow development approach utilises a conceptual ontology of domain processes and tasks, enterprise charts, and enterprise entities. It also suggests...
متن کاملAnalytic Methods and Workflows for EEG/ERP Domain
This work first summarizes the state of the art of analytic methods and workflows for the EEG/ERP domain. Since developing analytic methods is linked to collecting and sharing experimental data, electrophysiological experiments are also presented. Then the work deals with modelling of workflows in general and in the domain of electrophysiological experiments. Then it describes and evaluates eng...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2010